diff --git a/functions/ToolScripts/emuDeckPegasus.sh b/functions/ToolScripts/emuDeckPegasus.sh
index 58fdf2e6..ff6cfec6 100644
--- a/functions/ToolScripts/emuDeckPegasus.sh
+++ b/functions/ToolScripts/emuDeckPegasus.sh
@@ -46,18 +46,28 @@ pegasus_init(){
 	find $romsPath -type f -name "metadata.txt" -exec sed -i "s|/run/media/mmcblk0p1/Emulation|${emulationPath}|g" {} \;
 
 
+		if [ -L "$toolsPath/downloaded_media/gamecube" ]; then 
+			rm -rf "$toolsPath/downloaded_media/gamecube" &> /dev/null
+		fi 
+
+		if [ -L "$toolsPath/downloaded_media/3ds" ]; then 
+			rm -rf "$toolsPath/downloaded_media/3ds" &> /dev/null
+		fi
 
 		for systemPath in "$romsPath"/*; do
-			echo $romsPath
+			echo "$romsPath"
 			if  [[ "$systemPath" == "$romsPath/model2" || "$systemPath" == "$romsPath/xbox360" || "$systemPath" == "$romsPath/wiiu" ]]; then
-				rm -rf "$systemPath/roms/media" &> /dev/null;
-				rm -rf "$romsPath/xbox360/roms/xbla/media" &> /dev/null;
-				rm -rf "$romsPath/xbox360/roms/xbla/metadata.txt" &> /dev/null;
+				rm -rf "$systemPath/roms/media" &> /dev/null
+				rm -rf "$romsPath/xbox360/roms/xbla/media" &> /dev/null
+				rm -rf "$romsPath/xbox360/roms/xbla/metadata.txt" &> /dev/null
+			elif  [[ "$systemPath" == "$romsPath/gamecube" || "$systemPath" == "$romsPath/3ds" ]]; then
+				continue
 			else
-				rm -rf "$systemPath/media" &> /dev/null;
+				rm -rf "$systemPath/media" &> /dev/null
 			fi
 		done
 
+
 		for systemPath in "$romsPath"/*; do
 			if [[ "$systemPath" == "$romsPath/model2" || "$systemPath" == "$romsPath/xbox360" || "$systemPath" == "$romsPath/wiiu" ]]; then
 				system=$(echo "$systemPath" | sed 's/.*\/\([^\/]*\)\/\?$/\1/')
@@ -68,6 +78,8 @@ pegasus_init(){
 				rm -rf "$toolsPath/downloaded_media/$system/wheel" &> /dev/null
 				rm -rf "$toolsPath/downloaded_media/$system/screenshot" &> /dev/null
 				mkdir -p "$toolsPath/downloaded_media/$system/screenshots/"
+			elif  [[ "$systemPath" == "$romsPath/gamecube" || "$systemPath" == "$romsPath/3ds" ]]; then
+				continue 
 			else
 				system=$(echo "$systemPath" | sed 's/.*\/\([^\/]*\)\/\?$/\1/')
 				mkdir -p "$toolsPath/downloaded_media/$system/covers"
@@ -87,6 +99,8 @@ pegasus_init(){
 				ln -s "$toolsPath/downloaded_media/$system/covers/" "$toolsPath/downloaded_media/$system/box2dfront" &> /dev/null
 				ln -s "$toolsPath/downloaded_media/$system/marquees/" "$toolsPath/downloaded_media/$system/wheel" &> /dev/null
 				ln -s "$toolsPath/downloaded_media/$system/screenshots/" "$toolsPath/downloaded_media/$system/screenshot" &> /dev/null
+			elif  [[ "$systemPath" == "$romsPath/gamecube" || "$systemPath" == "$romsPath/3ds" ]]; then
+				continue
 			else
 				system=$(echo "$systemPath" | sed 's/.*\/\([^\/]*\)\/\?$/\1/')
 				ln -s "$toolsPath/downloaded_media/$system" "$systemPath/media" &> /dev/null
diff --git a/versions.json b/versions.json
index 8d2b9c09..eeed2307 100644
--- a/versions.json
+++ b/versions.json
@@ -15,7 +15,7 @@
   "srm": { "id": "srm", "code": "SRM", "version": 7 },
   "rmg": { "id": "rmg", "code": "RMG", "version": 0 },
   "esde": { "id": "esde", "code": "ESDE", "version": 2 },
-  "pegasus": { "id": "pegasus", "code": "Pegasus", "version": 2 },
+  "pegasus": { "id": "pegasus", "code": "Pegasus", "version": 3 },
   "mame": { "id": "mame", "code": "MAME", "version": 0 },
   "vita3k": { "id": "vita3k", "code": "Vita3k", "version": 0 },
   "scummvm": { "id": "scummvm", "code": "ScummVM", "version": 0 },